BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032G05SP1|AL429622
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig720 1171 0.0
3x_Contig1278 516 e-146
>3x_Contig720
Length = 2178
Score = 1171 bits (581), Expect = 0.0
Identities = 609/625 (97%), Gaps = 2/625 (0%)
Strand = Plus / Minus
Query: 275 ttttgckcggcagggtttcgaaactctataagacggaaata-gaagcacgtgtacgtcgg 333
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2178 ttttgctcggcagggtttcgaaactctataagacggaaataagaagcacgtgtacgtcgg 2119
Query: 334 ttcagaaggatgccattktggagcctgcraagctcagaaactccagtagckggaaaggta 393
||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 2118 ttcagaaggatgccattttggagcctgcaaagctcagaaactccagtagctggaaaggta 2059
Query: 394 aacaaaaaaaaaaggcacaagaaggaccagatcgacacaataaccgcatackgckggggt 453
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 2058 aacaaaaaaaaaaggcacaagaaggaccagatcgacacaataaccgcatactgctggggt 1999
Query: 454 tagcaaaacggaaaacgagaagcgattkgggaaaktgtttgaraatacgggaatatgcga 513
||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||
Sbjct: 1998 tagcaaaacggaaaacgagaagcgatttgggaaattgtttgaaaatacgggaatatgcga 1939
Query: 514 tgkacctkagtgtagatggaaggkgtkcatctgtttgctgtttgagacaggaagtctcca 573
|| |||| ||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 1938 tgtaccttagtgtagatggaaggtgttcatctgtttgctgtttgagacaggaagtctcca 1879
Query: 574 gtagacttttttcctcagctacatacctgcactactcagtttgtgagtgttcttcttcca 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1878 gtagacttttttcctcagctacatacctgcactactcagtttgtgagtgttcttcttcca 1819
Query: 634 agaaagaccagttcagcagtaacttttagttctagatttgcgaaaagcctgacagattag 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1818 agaaagaccagttcagcagtaacttttagttctagatttgcgaaaagcctgacagattag 1759
Query: 694 gaagggtttaataccgccaagagtttaaatgttgctgggaccacaccattttttggtacc 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1758 gaagggtttaataccgccaagagtttaaatgttgctgggaccacaccattttttggtacc 1699
Query: 754 tttttctcctcgtttaacctcatttgcgaagtgttggggggaaacatttgccttattggt 813
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1698 tttttctcctcgtttaacctcatttgcgaagtgtt-gggggaaacatttgccttattggt 1640
Query: 814 acagaaaagaattcagtaacatgtattgttttggttaagccgtgggkggttttatatttg 873
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1639 acagaaaagaattcagtaacatgtattgttttggttaagccgtgggtggttttatatttg 1580
Query: 874 gagctctttccattcttagtgtgtt 898
|||||||||||||||||||||||||
Sbjct: 1579 gagctctttccattcttagtgtgtt 1555
>3x_Contig1278
Length = 6932
Score = 516 bits (256), Expect = e-146
Identities = 292/308 (94%), Gaps = 2/308 (0%)
Strand = Plus / Plus
Query: 1 aagaacgtaaacaaacagaagaattccgctacgtatcattctcaaactgtgttgtcaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6606 aagaacgtaaacaaacagaagaattccgctacgtatcattctcaaactgtgttgtcaaat 6665
Query: 61 gtaaaakacgaaccctattgccagtgttttttctgckgaaaccactgtracgtcagtgcc 120
|||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct: 6666 gtaaaatacgaaccctattgccagtgttttttctgctgaaaccactgtaacgtcagtacc 6725
Query: 121 attcctgngtncactcgatttttttaacattcccttttcaatgkgtttttcctttttctt 180
||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6726 attcctgttttcactctatttttttaacattcccttttcaatgtgtttttcctttttctt 6785
Query: 181 tgcgagcataaacgakagggttttctgagaaaaccccattggkgaatkkccaaaagacgt 240
||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 6786 tgcgagcataaacgatagggttttctgagaaaaccccattggtgaatttccaaaagacgt 6845
Query: 241 catcctgtcatgtagttttctttggctttgtttcttttgckcggcagggtttcgaaactc 300
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 6846 catcctgtcatgtagttttctttggctttgtttcttttgctcggca-ggtttcg-aactc 6903
Query: 301 tataagac 308
||||||||
Sbjct: 6904 tataagac 6911
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6760
Number of Sequences: 1807
Number of extensions: 6760
Number of successful extensions: 196
Number of sequences better than 1.0e-20: 2
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)